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📊 covid: merge categories #3300
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Login: chart-diff: ✅
data-diff: ❌ Found differences= Dataset garden/health/2024-09-05/seattle_pathogens
= Table seattle_pathogens
~ Dim country
+ + New values: 574 / 3969 (14.46%)
date organism country
2019-10-21 Influenza A Seattle
2022-10-31 Influenza A Seattle
2022-12-19 Influenza A Seattle
2023-06-19 Influenza A Seattle
2024-04-15 Influenza A Seattle
~ Dim date
+ + New values: 574 / 3969 (14.46%)
country organism date
Seattle Influenza A 2019-10-21
Seattle Influenza A 2022-10-31
Seattle Influenza A 2022-12-19
Seattle Influenza A 2023-06-19
Seattle Influenza A 2024-04-15
~ Dim organism
+ + New values: 574 / 3969 (14.46%)
country date organism
Seattle 2019-10-21 Influenza A
Seattle 2022-10-31 Influenza A
Seattle 2022-12-19 Influenza A
Seattle 2023-06-19 Influenza A
Seattle 2024-04-15 Influenza A
~ Column percentage (changed metadata, new data)
+ + description_short: |-
- - description_short: The share of specimens detected with respiratory pathogen << organism >>.
? ^^^^^^^^^^^^^^^^^^
+ + The share of specimens detected with respiratory pathogen << organism >>. <% if organism == 'RSV' %>
? ^ +++++++++++++++++++++++++++
+ + This includes RSV A and RSV B.
+ + <% elif organism == 'Influenza A' %>
+ + This includes Influenza A H1N1 and H3N2.
+ + <% endif %>
+ + New values: 574 / 3969 (14.46%)
country date organism percentage
Seattle 2019-10-21 Influenza A 0.000000
Seattle 2022-10-31 Influenza A 0.796813
Seattle 2022-12-19 Influenza A 19.375000
Seattle 2023-06-19 Influenza A 1.680672
Seattle 2024-04-15 Influenza A 3.571429
~ Column present (changed metadata, new data)
+ + description_short: |-
- - description_short: The number of specimens detected with respiratory pathogen << organism >>.
? ^^^^^^^^^^^^^^^^^^
+ + The number of specimens detected with respiratory pathogen << organism >>. <% if organism == 'RSV' %>
? ^ +++++++++++++++++++++++++++
+ + This includes RSV A and RSV B.
+ + <% elif organism == 'Influenza A' %>
+ + This includes Influenza A H1N1 and H3N2.
+ + <% endif %>
+ + New values: 574 / 3969 (14.46%)
country date organism present
Seattle 2019-10-21 Influenza A 0
Seattle 2022-10-31 Influenza A 2
Seattle 2022-12-19 Influenza A 31
Seattle 2023-06-19 Influenza A 2
Seattle 2024-04-15 Influenza A 1
~ Column tested (changed metadata, new data)
- - title: Total number of specimens tested for pathogen <<organism>> present
? --------
+ + title: Total number of specimens tested for presence of pathogen <<organism>>
? ++++++++++++
- - The number of specimens tested to detect the respiratory pathogen << organism >>. Some of these specimens may have tested positive for the pathogen, while others (or all of them) may have tested negative.
+ + The number of specimens tested to detect the respiratory pathogen << organism >>. Some of these specimens may have tested positive for the pathogen, while others (or all of them) may have tested negative. <% if organism == 'RSV' %>
? +++++++++++++++++++++++++++
+ + This includes RSV A and RSV B.
+ + <% elif organism == 'Influenza A' %>
+ + This includes Influenza A H1N1 and H3N2.
+ + <% endif %>
+ + New values: 574 / 3969 (14.46%)
country date organism tested
Seattle 2019-10-21 Influenza A <NA>
Seattle 2022-10-31 Influenza A <NA>
Seattle 2022-12-19 Influenza A <NA>
Seattle 2023-06-19 Influenza A <NA>
Seattle 2024-04-15 Influenza A <NA>
+ + Table seattle_pathogens_month
+ + Column present_month
+ + Column tested_month
+ + Column percentage_month
Legend: +New ~Modified -Removed =Identical Details
Hint: Run this locally with etl diff REMOTE data/ --include yourdataset --verbose --snippet Automatically updated datasets matching weekly_wildfires|excess_mortality|covid|fluid|flunet|country_profile|garden/ihme_gbd/2019/gbd_risk are not included Edited: 2024-09-17 15:33:52 UTC |
lucasrodes
changed the title
🚧 Draft PR for branch seattle-flu
📊 covid: merge categories
Sep 17, 2024
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Address https://github.com/owid/owid-issues/issues/1653#issuecomment-2355981837